Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCCAAATGACACAGCAGGTGCCAGGA
.((((((((....(((......&.)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015125
GeneSymbolCIC
Binding site2332,2361
Score1.0
Seed1
Au0.382
Energy-17.4
Binding len17
Me-12.497
Phylopstem1.1037808
Phylopflank1.3049266125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure