Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCATATTTTGTATGCCCTGGA
.((.(((((((((.((((((..&))).))).)))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353957
GeneSymbolSCN1A
Binding site10834,10856
Score1.0
Seed0
Au0.662
Energy-17.7
Binding len22
Me-7.682
Phylopstem4.468498888888888
Phylopflank4.12383463875
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure