Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGCTGCGCTGCC
..(((((.(((((((((....&)))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015133
GeneSymbolMAPK8IP3
Binding site5438,5456
Score0.846
Seed0
Au0.235
Energy-23.5
Binding len18
Me-7.271
Phylopstem0.06438366
Phylopflank1.1226175069999995
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure