Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGGCCCCTGCTCCTTTGTATGTTGGGTG
(((((((((((((.((((....&.))))....))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015134
GeneSymbolMPRIP
Binding site7552,7585
Score0.846
Seed1
Au0.456
Energy-18.7
Binding len23
Me-4.794
Phylopstem-0.4983800769230769
Phylopflank-0.7251223375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure