Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACTCAGAACTTGGAGCCAT
...(((((((.((((((((((.&))))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353957
GeneSymbolSCN1A
Binding site4129,4150
Score1.0
Seed0
Au0.544
Energy-25.3
Binding len21
Me-9.339
Phylopstem0.45038436000000004
Phylopflank-0.07546505624999997
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure