Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGCTGTGAGGTGCAACTGGAGCTGCAGC
((((((((.((((((((....&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015136
GeneSymbolSTAB1
Binding site6216,6248
Score0.827
Seed1
Au0.338
Energy-25.6
Binding len19
Me-4.994
Phylopstem1.31559325
Phylopflank2.170826166375
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure