Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCCGGCGAGGAGTGGGCTGGCGGCGGTAGCTGTC
..((((((((.(((((..(((&.))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015137
GeneSymbolEFR3A
Binding site9,47
Score0.846
Seed1
Au0.221
Energy-21.8
Binding len20
Me-7.782
Phylopstem0.171301125
Phylopflank0.4030178475000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure