Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGCTAAATGCTGGGG
.(((((((((((((((......&))))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015139
GeneSymbolSLC35D1
Binding site1940,1961
Score1.0
Seed1
Au0.588
Energy-17.4
Binding len21
Me-3.793
Phylopstem0.06985670999999997
Phylopflank-0.03171788874999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure