Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGGTGTGTGCCAC
...(((((((((.(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015139
GeneSymbolSLC35D1
Binding site5527,5544
Score0.846
Seed0
Au0.515
Energy-17.6
Binding len17
Me-7.804
Phylopstem4.424027888888889
Phylopflank4.343004908125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure