Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTAGGCCCCGCCGCCAGGCCACCGCTGCTGCGGC
(((((((.(((((.((..(((&.)))..)).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015139
GeneSymbolSLC35D1
Binding site93,131
Score0.846
Seed1
Au0.294
Energy-24.3
Binding len23
Me-7.108
Phylopstem1.1545512
Phylopflank1.9569962650000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure