Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGGGAGAGCAGCTGTGAA
((((((((((..((.((((((&)))))).))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015139
GeneSymbolSLC35D1
Binding site2544,2566
Score0.923
Seed1
Au0.5
Energy-20.2
Binding len22
Me-10.845
Phylopstem0.26181021000000004
Phylopflank-0.027223142500000012
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure