Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACATAGTTGGGAACCTCATTAGAAATGACCTCAGCTGCC
..(((((((.((((((((((.&)))))))........................))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015143
GeneSymbolMETAP1
Binding site2263,2306
Score0.846
Seed1
Au0.544
Energy-20.4
Binding len43
Me-6.2
Phylopstem0.22751621764705884
Phylopflank0.21147141249999998
Longest consecutive pairings7
Position of longest consecutive pairings36
Pairings in 3prime end7
Position3UTR
2D Structure