Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAGGTGCAGCTGCGTGGTCTGGTATACATGCTGCAAA
((((((((((((((((((((.&)))...))))))))))...............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015146
GeneSymbolSEPTIN8
Binding site1787,1826
Score0.872
Seed1
Au0.544
Energy-23.1
Binding len39
Me-3.938
Phylopstem-0.14963697105263155
Phylopflank0.0165303725
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure