Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACCACTGCCTGGGCTGCAT
.((((((((((((.((.((((&)))).)).)))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015149
GeneSymbolRGL1
Binding site1285,1309
Score0.923
Seed1
Au0.515
Energy-23.3
Binding len24
Me-4.65
Phylopstem5.592065866666666
Phylopflank4.769911028749998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure