Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACCTCTGCCTGCAT
.((((((.(.(((((.(((((&)))))))))).).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015149
GeneSymbolRGL1
Binding site3461,3482
Score0.846
Seed1
Au0.412
Energy-20.5
Binding len21
Me-7.583
Phylopstem0.28189924285714285
Phylopflank0.5835344062499999
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure