Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATTTGCACTGGGCACTCCAATCCTGGAGAGGATGCCAGGG
.((((((((.((.(((((((((&))))))))).)).....................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015150
GeneSymbolRFTN1
Binding site1911,1953
Score0.846
Seed1
Au0.426
Energy-17.9
Binding len42
Me-6.325
Phylopstem-0.3184608888888889
Phylopflank1.4515616637499997
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure