Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACGGCCATTCAGACTGCAC
.((((((((.((((((..(((&)))..))))))...))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015156
GeneSymbolRCOR1
Binding site3079,3103
Score0.846
Seed1
Au0.485
Energy-20.3
Binding len24
Me-5.036
Phylopstem0.3337987777777778
Phylopflank-0.41987544125000004
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure