Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAGCTGATCTGACAGGGGTCTGCCCTAAGGGTCTCACAGCTGCT
..(((((((((((((((((((&))))))))))))..............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015159
GeneSymbolFAM168A
Binding site7020,7070
Score0.923
Seed1
Au0.426
Energy-23.8
Binding len50
Me-4.957
Phylopstem1.0305094491836735
Phylopflank2.4881390125000005
Longest consecutive pairings12
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure