Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTATAGCTGCAAC
(((((((((.(((((..((((&)))))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015162
GeneSymbolACSBG1
Binding site5490,5511
Score0.923
Seed1
Au0.441
Energy-22.6
Binding len21
Me-5.413
Phylopstem4.247532444444444
Phylopflank3.2876177675000005
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure