Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCTGGGG
.((((((((((...........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015167
GeneSymbolJMJD6
Binding site616,627
Score0.923
Seed1
Au0.5
Energy-16.5
Binding len11
Me-10.255
Phylopstem5.317016
Phylopflank5.758183592500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure