Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAAGCCCGTGGTTTTGTTGAATGCGCAAG
(((((((((((((((((((((&)))))))))..))))))))...........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015167
GeneSymbolJMJD6
Binding site325,360
Score0.923
Seed1
Au0.485
Energy-21.4
Binding len35
Me-3.938
Phylopstem3.236216064705883
Phylopflank4.38987481
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure