Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGGAGCTCAAG
(((.((((.(((((((.....&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015167
GeneSymbolJMJD6
Binding site178,194
Score0.846
Seed0
Au0.338
Energy-19.6
Binding len16
Me-8.026
Phylopstem-0.7262462857142857
Phylopflank-0.2108614325
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure