Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGAGAACGACTGCCGGCGGCTGCAC
.((((((((((((.((.....&.)).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015171
GeneSymbolXPO6
Binding site2223,2250
Score0.904
Seed1
Au0.382
Energy-22.2
Binding len18
Me-4.65
Phylopstem4.928162
Phylopflank4.615981925
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure