Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGAGCCGCTGGGGCTGCAGT
((((((((((((((...((((&))))...))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015175
GeneSymbolNBEAL2
Binding site5218,5243
Score0.872
Seed1
Au0.324
Energy-25.3
Binding len25
Me-4.906
Phylopstem2.138702235294118
Phylopflank3.990332875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure