Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTCTGCAGCCCTAACAACAATGCAGCTCTTCTCCAAGCAAA
((((((((((((((((.(((.&.))).)))))..))))))).........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015176
GeneSymbolFBXO28
Binding site738,782
Score0.808
Seed1
Au0.544
Energy-20.4
Binding len33
Me-3.938
Phylopstem4.847296277777777
Phylopflank5.362665631249998
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure