Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACGTACAAATTCCATGCGGCCTGGAGCTCCGTGTTGCAGCTGCT
..(((((((((((((((.((.&.)).)))))))..............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015179
GeneSymbolRRP12
Binding site1541,1590
Score0.923
Seed1
Au0.412
Energy-24.4
Binding len34
Me-4.957
Phylopstem3.831358834482759
Phylopflank3.785058975
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure