Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGCAGCCCTACCCCTGCAGCTGCT
..((((((((((..(((.(((&.))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015180
GeneSymbolSYNE2
Binding site20689,20716
Score0.923
Seed1
Au0.294
Energy-25.4
Binding len21
Me-7.103
Phylopstem2.15785812
Phylopflank2.5683978649999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure