Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCC
..(((((((((((((.((((.&.)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015185
GeneSymbolARHGEF9
Binding site2922,2968
Score0.846
Seed1
Au0.574
Energy-24.2
Binding len21
Me-5.19
Phylopstem-0.005810806666666653
Phylopflank1.15611803375
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure