Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCCGCAGCTGA
...(((((((((.(((.....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015186
GeneSymbolVPS13A
Binding site50,63
Score0.923
Seed0
Au0.279
Energy-20.9
Binding len13
Me-7.804
Phylopstem-1.1246462222222222
Phylopflank-0.46629077949999986
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure