Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACACCGGTGCCAGGG
.((((((((....(((......&)))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015191
GeneSymbolSIK2
Binding site6855,6870
Score0.846
Seed1
Au0.441
Energy-16.4
Binding len15
Me-12.497
Phylopstem-0.5358555
Phylopflank0.10091413124999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure