Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGGAGCCTTGAGCAGCAGCTGCAGG
((((((((((.(((.((((((&.))))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015191
GeneSymbolSIK2
Binding site2226,2255
Score0.808
Seed1
Au0.426
Energy-27.2
Binding len22
Me-7.498
Phylopstem5.327591869999999
Phylopflank4.60322210875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure