Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCACAGCCAAGTCAGCAGCTGCC
..((((((((((((((..(((&))).))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015191
GeneSymbolSIK2
Binding site2345,2370
Score0.872
Seed1
Au0.353
Energy-23.6
Binding len25
Me-4.957
Phylopstem1.9508835799999997
Phylopflank3.445070909999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure