Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCGGCCCGCTGGCTGGAGG
((.(((((((((((((((((.&))))))))))).).....))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015201
GeneSymbolBOP1
Binding site1593,1620
Score0.897
Seed0
Au0.265
Energy-24.3
Binding len27
Me-5.495
Phylopstem1.8843531826086954
Phylopflank1.9497353400000001
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure