Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGAACCGCAGCTGA
...(((((((((((.(..((.&)).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015202
GeneSymbolKATNIP
Binding site6481,6498
Score0.923
Seed0
Au0.574
Energy-22.8
Binding len17
Me-7.25
Phylopstem-0.5460956545454546
Phylopflank-0.04317593500000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure