Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACGGGCTCAGCTGCT
..(((((((.(.((((.((((&)))))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015202
GeneSymbolKATNIP
Binding site4123,4142
Score1.0
Seed1
Au0.382
Energy-22.4
Binding len19
Me-9.546
Phylopstem-0.2308874285714286
Phylopflank3.42330885
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure