Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCGGCTGCAGACCGCGGA
((((.((((((((((((((.(&).))))))))))))).).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015210
GeneSymbolMTCL1
Binding site2523,2546
Score0.923
Seed0
Au0.368
Energy-23.5
Binding len23
Me-8.057
Phylopstem1.6707099133333334
Phylopflank1.3099137375
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure