Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGACCCCGCCGCTGCAGC
(((((((.((((..((..(((&)))..)).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015213
GeneSymbolDENND5A
Binding site3510,3531
Score0.846
Seed1
Au0.338
Energy-23.3
Binding len21
Me-8.397
Phylopstem6.211303142857141
Phylopflank6.154795722499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure