Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTTAGTGCTTCAGGA
.((((((((..((((((((...&))))))))..))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015216
GeneSymbolPPIP5K2
Binding site12090,12111
Score0.846
Seed1
Au0.676
Energy-18.4
Binding len21
Me-7.861
Phylopstem-0.17417881249999997
Phylopflank0.23717379374999997
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure