Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTAGAACTGGAGCCCTTTGACTGTGGCTGTGAT
(((((((((((((((.((((.&.))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015225
GeneSymbolPRUNE2
Binding site1096,1135
Score0.923
Seed1
Au0.456
Energy-22.9
Binding len21
Me-4.171
Phylopstem-0.20068629333333332
Phylopflank-0.14324185625000002
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure