Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAGCAGCTGTT
..((((((((...((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015231
GeneSymbolNUP160
Binding site2135,2152
Score0.821
Seed1
Au0.544
Energy-20.9
Binding len17
Me-12.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure