Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGTAACCGCTTGGTGCC
..(((.(.(((((((.(((((&)))))..)))))))..).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015231
GeneSymbolNUP160
Binding site4257,4279
Score0.846
Seed0
Au0.544
Energy-20.6
Binding len22
Me-9.405
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure