Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAGGCAACTGTTATCTGGCTGCT
..((((((((((((((...((&))...)))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015231
GeneSymbolNUP160
Binding site3289,3314
Score0.862
Seed1
Au0.544
Energy-19.5
Binding len25
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure