Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGTATTTTGACCAGGC
.(((((((...(((((((((((&))))))))))).)).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015233
GeneSymbolMTUS2
Binding site2210,2231
Score0.846
Seed1
Au0.5
Energy-15.0
Binding len21
Me-8.917
Phylopstem-0.036094181818181775
Phylopflank-0.25805660750000003
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure