Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGCTCCAGGAGCTGGAGGAGCGGCTGCAGCTGCAAT
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015233
GeneSymbolMTUS2
Binding site402,442
Score1.0
Seed1
Au0.324
Energy-28.5
Binding len18
Me-3.938
Phylopstem1.8972808687500005
Phylopflank1.9226170787499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure