Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAGCAAC
((((.(((((.(((((.....&.))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015237
GeneSymbolBTBD8
Binding site460,508
Score1.0
Seed0
Au0.588
Energy-20.1
Binding len18
Me-10.881
Phylopstem1.0465308
Phylopflank1.4594587518625
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure