Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCCGCAGCTGCC
..(((((((((((.((..(((&))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015239
GeneSymbolAGTPBP1
Binding site19,37
Score0.846
Seed1
Au0.167
Energy-26.8
Binding len18
Me-5.814
Phylopstem1.7864757909090911
Phylopflank1.2607108741666666
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure