Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTCAGCTATGCCAGGG
.((((((((((...(((((...&)))))...).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015241
GeneSymbolMICAL3
Binding site1356,1376
Score1.0
Seed1
Au0.397
Energy-21.3
Binding len20
Me-9.286
Phylopstem0.09559534545454546
Phylopflank-0.45698686625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure