Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCCGGAGCTGTGGG
((((((((.(((((...((((&))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015242
GeneSymbolARAP1
Binding site437,456
Score0.846
Seed1
Au0.324
Energy-21.9
Binding len19
Me-5.962
Phylopstem-0.151010875
Phylopflank-0.1354300579999999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure