Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGAAGAGCCGCTGCAAC
(((((((.((..(((((.(((&))).)))))...)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015242
GeneSymbolARAP1
Binding site2675,2698
Score0.846
Seed1
Au0.382
Energy-20.9
Binding len23
Me-12.423
Phylopstem2.8847125714285715
Phylopflank2.5913348712500004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure