Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCCAACTGCAGCATTGGGAA
((.(((((((((((((((((.&)))))..))))))))))..)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015245
GeneSymbolANKS1A
Binding site2087,2112
Score0.808
Seed0
Au0.485
Energy-22.3
Binding len25
Me-5.495
Phylopstem3.779923457142857
Phylopflank4.6502660825
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure